TaXplorer

Explore ECFs while browsing through the NCBI taxonomy. Here, you can find all the taxa we used while classifying ECFs. Currently, we are working on an iterative process to possess the latest version of the NCBI assembly datasets.

Search for taxa


Taxonomic Tree

Click on on the left to see the taxon and how many ECF Proteins have been detected

You can see the taxon, you choosed. Click on the arrow up button to view the taxon's parent. Click on the black plus button (if available), to see its children. The number of all sequences assigned to the taxa are shown in square brackets (e.g. Acidobacteria [ total: 34 ]).

If you have filtered by ECF groups the number of sequences of the selected groups are additionally shown (e.g. Acidobacteria [ total: 10/34 ]). You can also click on the blue plus to show the sequences for each ECF group assigned to the taxa.


Search result

Displaying Taxa 1 - 10 of 47 in total

Id  Scientific name  Rank  Total #sequences Actions
2047 Rothia dentocariosa species 3 Info
32207 Rothia genus 67 Info
43675 Rothia mucilaginosa species 1 Info
172042 Rothia aeria species 3 Info
553201 Rothia mucilaginosa ATCC 25296 no rank 1 Info
563032 Rothia dentocariosa M567 no rank 3 Info
563033 Rothia mucilaginosa M508 no rank 1 Info
680646 Rothia mucilaginosa DY-18 no rank 1 Info
762948 Rothia dentocariosa ATCC 17931 no rank 3 Info
888019 Rothia aeria F0184 no rank 3 Info


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