TaXplorer

Explore ECFs while browsing through the NCBI taxonomy. Here, you can find all the taxa we used while classifying ECFs. Currently, we are working on an iterative process to possess the latest version of the NCBI assembly datasets.

Search for taxa


Taxonomic Tree

Click on on the left to see the taxon and how many ECF Proteins have been detected

You can see the taxon, you choosed. Click on the arrow up button to view the taxon's parent. Click on the black plus button (if available), to see its children. The number of all sequences assigned to the taxa are shown in square brackets (e.g. Acidobacteria [ total: 34 ]).

If you have filtered by ECF groups the number of sequences of the selected groups are additionally shown (e.g. Acidobacteria [ total: 10/34 ]). You can also click on the blue plus to show the sequences for each ECF group assigned to the taxa.


Search result

Displaying Taxa 1 - 10 of 12 in total

Id  Scientific name  Rank  Total #sequences Actions
1293497 Nitrospinae phylum 26 Info
1801680 Nitrospinae bacterium RIFCSPHIGHO2_02_39_11 species 2 Info
1801681 Nitrospinae bacterium RIFCSPHIGHO2_02_FULL_39_82 species 1 Info
1801682 Nitrospinae bacterium RIFCSPHIGHO2_12_FULL_39_42 species 2 Info
1801683 Nitrospinae bacterium RIFCSPLOWO2_01_FULL_39_10 species 1 Info
1801684 Nitrospinae bacterium RIFCSPLOWO2_02_39_17 species 1 Info
1801685 Nitrospinae bacterium RIFCSPLOWO2_02_FULL_39_110 species 1 Info
1801686 Nitrospinae bacterium RIFCSPLOWO2_12_FULL_39_93 species 1 Info
1801687 Nitrospinae bacterium RIFCSPLOWO2_12_FULL_45_22 species 1 Info
1801688 Nitrospinae bacterium RIFCSPLOWO2_12_FULL_47_7 species 2 Info


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