TaXplorer

Explore ECFs while browsing through the NCBI taxonomy. Here, you can find all the taxa we used while classifying ECFs. Currently, we are working on an iterative process to possess the latest version of the NCBI assembly datasets.

Search for taxa


Taxonomic Tree

Click on on the left to see the taxon and how many ECF Proteins have been detected

You can see the taxon, you choosed. Click on the arrow up button to view the taxon's parent. Click on the black plus button (if available), to see its children. The number of all sequences assigned to the taxa are shown in square brackets (e.g. Acidobacteria [ total: 34 ]).

If you have filtered by ECF groups the number of sequences of the selected groups are additionally shown (e.g. Acidobacteria [ total: 10/34 ]). You can also click on the blue plus to show the sequences for each ECF group assigned to the taxa.


Search result

Displaying Taxa 1 - 10 of 21 in total

Id  Scientific name  Rank  Total #sequences Actions
1802112 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_45_13 species 1 Info
1802113 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_44_130 species 2 Info
1802114 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22 species 2 Info
1802115 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27 species 4 Info
1802116 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_80 species 1 Info
1802117 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_45_13b species 2 Info
1802118 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_45_17b species 1 Info
1802119 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_45_43 species 2 Info
1802120 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_47_25 species 3 Info
1802121 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_48_12 species 4 Info


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