ECF47

This group dissipated from the ECF classification during the reclassification by [[Casas-Pastor et al.]]!

Taxonomical distribution

This group is restricted to Actinobacteria (Huang et al., 2015).

Experimentally studied examples

None.

Genomic context conservation

σ factors of this group are putatively co-transcribed with their cognate anti-σ factors but the genomic context conservation does not go beyond the σ/anti-σ pair (Huang et al., 2015).

Signaling mechanism

These anti-σ factors are predicted membrane-spanning proteins that contain an N-terminal ASD and show a weak similarity to M. tuberculosis RskA (regulator of SigK, which belongs to group ECF19) (Huang et al., 2015). No further details are available regarding the molecular mechanism controlling the activation of ECF47 σ factors.

Physiological function

Unknown.

Re-classification

This group is present in new ECF218 together with original groups ECF49 and ECF50. 29.27% of the proteins from ECF218 have homology to original ECF47.

References

Huang X, Pinto D, Fritz G, Mascher T. 2015. Environmental Sensing in Actinobacteria: a Comprehensive Survey on the Signaling Capacity of This Phylum. Journal of Bacteriologie 197:2517–2535.
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